Browsing by Subject "GERMINATION"

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  • Alakärppä, Emmi; Taulavuori, Erja; Valledor, Luis; Marttila, Toni; Jokipii-Lukkari, Soile; Karppinen, Katja; Nguyen, Nga; Taulavuori, Kari; Häggman, Hely (2019)
    Plants have evolved a suite of photoreceptors to perceive information from the surrounding light conditions. The aim of this study was to examine photomorphogenic effects of light quality on the growth of Scots pine (Pinus sylvestris L.) seedlings representing southern (60 °N) and northern (68 °N) origins in Finland. We measured the growth characteristics and the expression of light-responsive genes from seedlings grown under two LED light spectra: (1) Retarder (blue and red wavelengths in ratio 0.7) inducing compact growth, and (2) Booster (moderate in blue, green and far-red wavelengths, and high intensity of red light) promoting shoot elongation. The results show that root elongation, biomass, and branching were reduced under Retarder spectrum in the seedlings representing both origins, while inhibition in seed germination and shoot elongation was mainly detected in the seedlings of northern origin. The expression of ZTL and HY5 was related to Scots pine growth under both light spectra. Moreover, the expression of PHYN correlated with growth when exposed to Retarder, whereas CRY2 expression was associated with growth under Booster. Our data indicates that blue light and the deficiency of far-red light limit the growth of Scots pine seedlings and that northern populations are more sensitive to blue light than southern populations. Furthermore, the data analyses suggest that ZTL and HY5 broadly participate in the light-mediated growth regulation of Scots pine, whereas PHYN responses to direct sunlight and the role of CRY2 is in shade avoidance. Altogether, our study extends the knowledge of light quality and differential gene expression affecting the early growth of Scots pines representing different latitudinal origins.
  • Yoshida, Satoko; Kim, Seungill; Wafula, Eric K.; Tanskanen, Jaakko; Kim, Yong-Min; Honaas, Loren; Yang, Zhenzhen; Spallek, Thomas; Conn, Caitlin E.; Ichihashi, Yasunori; Cheong, Kyeongchae; Cui, Songkui; Der, Joshua P.; Gundlach, Heidrun; Jiao, Yuannian; Hori, Chiaki; Ishida, Juliane K.; Kasahara, Hiroyuki; Kiba, Takatoshi; Kim, Myung-Shin; Koo, Namjin; Laohavisit, Anuphon; Lee, Yong-Hwan; Lumba, Shelley; McCourt, Peter; Mortimer, Jenny C.; Mutuku, J. Musembi; Nomura, Takahito; Sasaki-Sekimoto, Yuko; Seto, Yoshiya; Wang, Yu; Wakatake, Takanori; Sakakibara, Hitoshi; Demura, Taku; Yamaguchi, Shinjiro; Yoneyama, Koichi; Manabe, Ri-ichiroh; Nelson, David C.; Schulman, Alan H.; Timko, Michael P.; DePamphilis, Claude W.; Choi, Doil; Shirasu, Ken (2019)
    Parasitic plants in the genus Striga, commonly known as witchweeds, cause major crop losses in sub-Saharan Africa and pose a threat to agriculture worldwide. An understanding of Striga parasite biology, which could lead to agricultural solutions, has been hampered by the lack of genome information. Here, we report the draft genome sequence of Striga asiatica with 34,577 predicted protein-coding genes, which reflects gene family contractions and expansions that are consistent with a three-phase model of parasitic plant genome evolution. Striga seeds germinate in response to host-derived strigolactones (SLs) and then develop a specialized penetration structure, the haustorium, to invade the host root. A family of SL receptors has undergone a striking expansion, suggesting a molecular basis for the evolution of broad host range among Striga spp. We found that genes involved in lateral root development in non-parasitic model species are coordinately induced during haustorium development in Striga, suggesting a pathway that was partly co-opted during the evolution of the haustorium. In addition, we found evidence for horizontal transfer of host genes as well as retrotransposons, indicating gene flow to S. asiatica from hosts. Our results provide valuable insights into the evolution of parasitism and a key resource for the future development of Striga control strategies.
  • Faria, J. C. T.; Melo, L. A.; Assumpcao, C. R. M.; Brondani, G. E.; Breier, T. B.; Faria, J. M. R. (2019)
    This study aimed to analyze the physical properties of the seeds of Moquiniastrum polymorphum when processed by mini-SAS, X-ray and seed blower systems. The seeds were purchased from Seeds Caicara, located in Penapolis-SP. After purchase, the seed lot was characterized by standard tests. In the X-ray test the seeds were classified according to their internal morphology as filled, unfilled or malformed. The seed blower was set at six opening settings, resulting in light and heavy fractions. The evaluations were performed by weighing the seeds that remained in the blower (heavy fraction) and by the amount of filled seeds indicated by the X-ray test. The germination tests were composed of four replicates of 50 seeds. The mini-SAS was used for external evaluation. It was concluded that the combined use of the seed blower and the X-ray test was efficient for the evaluation and determination of the physical quality of the seeds of M. polymorphum. The seed blower at opening settings 5 resulted in the best lot quality. The external parameters were not able to qualitatively evaluate the seeds of M. polymorphum.
  • Limpens, Juul; Fijen, Thijs P. M.; Keizer, Iris; Meijer, Johan; Olsthoorn, Fanny; Pereira, Ana; Postma, Roel; Suyker, Mariette; Vasander, Harri; Holmgren, Milena (2021)
    Arctic and subarctic ecosystems are changing rapidly in species composition and functioning as they warm twice as fast as the global average. It has been suggested that tree-less boreal landscapes may shift abruptly to tree-dominated states as climate warms. Yet, we insufficiently understand the conditions and mechanisms underlying tree establishment in the subarctic and arctic regions to anticipate how climate change may further affect ecosystem structure and functioning. We conducted a field experiment to assess the role of permafrost presence, micro-topography and shrub canopy on tree establishment in almost tree-less subarctic peatlands of northern Finland. We introduced seeds and seedlings of four tree-line species and monitored seedling survival and environmental conditions for six growing seasons. Our results show that once seedlings have emerged, the absence of permafrost can enhance early tree seedling survival, but shrub cover is the most important driver of subsequent tree seedling survival in subarctic peatlands. Tree seedling survival was twice as high under an intact shrub canopy than in open conditions after shrub canopy removal. Under unclipped control conditions, seedling survival was positively associated with dense shrub canopies for half of the tree species studied. These strong positive interactions between shrubs and trees may facilitate the transition from today's treeless subarctic landscapes towards tree-dominated states. Our results suggest that climate warming may accelerate this vegetation shift as permafrost is lost, and shrubs further expand across the subarctic.
  • Perri, Giuseppe; Coda, Rossana; Rizzello, Carlo; Celano , Giuseppe; Ampollini, Marco; Gobbetti, Marco; De Angelis, Maria; Calasso, Maria (2021)
    Exopolysaccharides produced in situ by lactic acid bacteria during sourdough fermentation are recognized as bread texture improvers. In this study, the suitability of whole and sprouted lentil flours, added with 25% on flour weight sucrose for dextran formation by selected strains during sourdough fermentation, was evaluated. The dextran synthesized in situ by Weissella confusa SLA4 was 9.2 and 9.7% w/w flour weight in lentil and sprouted lentil sourdoughs, respectively. Wheat bread supplemented with 30% w/w sourdough showed increased specific volume and decreased crumb hardness and staling rate, compared to the control wheat bread. Incorporation of sourdoughs improved the nutritional value of wheat bread, leading to increased total and soluble fibers content, and the aroma profile. The integrated biotechnological approach, based on sourdough fermentation and germination, is a potential clean-label strategy to obtain high-fibers content foods with tailored texture, and it can further enhance the use of legumes in novel foods.
  • Norros, Veera Maria; Karhu, Elina; Nordén, Jenni; Vähätalo, Anssi Vesa; Ovaskainen, Otso Tapio (2015)
    Assessment of the costs and benefits of dispersal is central to understanding species' life-history strategies as well as explaining and predicting spatial population dynamics in the changing world. While mortality during active movement has received much attention, few have studied the costs of passive movement such as the airborne transport of fungal spores. Here, we examine the potential of extreme environmental conditions to cause dispersal mortality in wood-decay fungi. These fungi play a key role as decomposers and habitat creators in forest ecosystems and the populations of many species have declined due to habitat loss and fragmentation. We measured the effect of simulated solar radiation (including ultraviolet A and B) and freezing at -25 degrees C on the spore germinability of 17 species. Both treatments but especially sunlight markedly reduced spore germinability in most species, and species with thin-walled spores were particularly light sensitive. Extrapolating the species' laboratory responses to natural irradiance conditions, we predict that sunlight is a relevant source of dispersal mortality at least at larger spatial scales. In addition, we found a positive effect of spore size on spore germinability, suggesting a trade-off between dispersal distance and establishment. We conclude that freezing and particularly sunlight can be important sources of dispersal mortality in wood-decay fungi which can make it difficult for some species to colonize isolated habitat patches and habitat edges.