Browsing by Subject "Plant phenotyping"

Sort by: Order: Results:

Now showing items 1-2 of 2
  • Pavicic, M.; Wang, F.; Mouhu, K.; Himanen, K. (2019)
    Seed quality is an important factor for seedling vigour as well as adult plant resilience. The key quality attributes are related to physical characteristics, physiological performance, genetic background and health status of the seeds. Many ways to address seed quality attributes have been developed and recently many of them have featured automated high throughput methods. In our study, we addressed two of the seed quality attributes, namely physiological performance and genetic background by analysing germination rates in our mutant collection. These mutants represent ubiquitin E3 ligases that transcriptionally respond to abscisic acid (ABA). This plant hormone is an important regulator of germination and seedling establishment. To facilitate in vitro germination screens of large seed collections a high throughput image-based assay was developed. As a read out of the germination on ABA treatment the cotyledon emergence was detected with top view chlorophyll fluorescence camera. By applying the ABA treatment during germination, RING-type ubiquitin E3 ligase mutants were identified, showing either resistant or sensitive responses to ABA. In conclusion, a scalable high throughput screen for in vitro germination assay was established that allowed fast screening of tens of mutants in a hormone supplemented media.
  • Rey-Carames, Clara; Tardaguila, Javier; Sanz-Garcia, Andres; Chica-Olmo, Mario; Diago, Maria P. (2016)
    Precision viticulture requires the characterisation of the spatio-temporal variability of the vineyard status to design the appropriate management for each area. The goal of this work was to characterise the spatio-temporal variability of leaf chlorophyll (Chl) and nitrogen (N) content and their relationship with the vegetative growth in a three ha commercial vineyard (Vitis vinifera L.) using a geostatistical approach. Leaf Chl and N contents were assessed by two fluorescence indices provided by a hand-held fluorescence sensor. Fluorescence measurements were taken along five dates, from veraison to harvest, on 72 sampling points delineated on a regular grid across the vineyard. Shoot pruning weight (SPW) was measured for each sampling point as indicator of the grapevine vegetative growth. Geostatistical analysis was applied to model the spatial variability of leaf Chl and N content and SPW. The spread showed an increase of the variability of leaf Chl and N content during the ripening period, reaching maximum values prior to harvest. The variograms illustrated a similarity of the spatial variability structure of leaf Chl at all timings, unlike N which showed changing spatial variability structures along the ripening period. The Kappa index evidenced a slight intra-season stability for both Chl and N and showed that N could not be used alone as an indicator to delineate vigour management areas. The existence of spatio-temporal variability of key vegetative components was proved and its knowledge is crucial to implement precision viticulture approach such as variable rate application of fertilizers or water as needed. (C) 2016 IAgrE. Published by Elsevier Ltd. All rights reserved.