The position of nonsense mutations can predict the phenotype severity : A survey on the DMD gene

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Torella , A , Zanobio , M , Zeuli , R , Blanco , F D V , Savarese , M , Giugliano , T , Garofalo , A , Piluso , G , Politano , L & Nigro , V 2020 , ' The position of nonsense mutations can predict the phenotype severity : A survey on the DMD gene ' , PLoS One , vol. 15 , no. 8 , 0237803 . https://doi.org/10.1371/journal.pone.0237803

Title: The position of nonsense mutations can predict the phenotype severity : A survey on the DMD gene
Author: Torella, Annalaura; Zanobio, Mariateresa; Zeuli, Roberta; Blanco, Francesca del Vecchio; Savarese, Marco; Giugliano, Teresa; Garofalo, Arcomaria; Piluso, Giulio; Politano, Luisa; Nigro, Vincenzo
Contributor: University of Helsinki, Medicum
Date: 2020-08-19
Language: eng
Number of pages: 13
Belongs to series: PLoS One
ISSN: 1932-6203
URI: http://hdl.handle.net/10138/319660
Abstract: A nonsense mutation adds a premature stop signal that hinders any further translation of a protein-coding gene, usually resulting in a null allele. To investigate the possible exceptions, we used theDMDgene as an ideal model. First, because dystrophin absence causes Duchenne muscular dystrophy (DMD), while its reduction causes Becker muscular dystrophy (BMD). Second, theDMDgene is X-linked and there is no second allele that can interfere in males. Third, databases are accumulating reports on many mutations and phenotypic data. Finally, becauseDMDmutations may have important therapeutic implications. For our study, we analyzed large databases (LOVD, HGMD and ClinVar) and literature and revised critically all data, together with data from our internal patients. We totally collected 2593 patients. Positioning these mutations along the dystrophin transcript, we observed a nonrandom distribution of BMD-associated mutations within selected exons and concluded that the position can be predictive of the phenotype. Nonsense mutations always cause DMD when occurring at any point in fifty-one exons. In the remaining exons, we found milder BMD cases due to early 5' nonsense mutations, if reinitiation can occur, or due to late 3' nonsense when the shortened product retains functionality. In the central part of the gene, all mutations in some in-frame exons, such as in exons 25, 31, 37 and 38 cause BMD, while mutations in exons 30, 32, 34 and 36 cause DMD. This may have important implication in predicting the natural history and the efficacy of therapeutic use of drug-stimulated translational readthrough of premature termination codons, also considering the action of internal natural rescuers. More in general, our survey confirm that a nonsense mutation should be not necessarily classified as a null allele and this should be considered in genetic counselling.
Subject: DUCHENNE MUSCULAR-DYSTROPHY
ALTERNATIVELY SPLICED ISOFORMS
POINT MUTATIONS
CHINESE PATIENTS
DIAGNOSIS
SPECTRUM
EXON
DELETIONS
SEQUENCE
ENHANCER
3111 Biomedicine
1184 Genetics, developmental biology, physiology
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