Missense variant in LOXHD1 is associated with canine nonsyndromic hearing loss

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Hytönen , M K , Niskanen , J E , Arumilli , M , Brookhart-Knox , C A , Donner , J & Lohi , H 2021 , ' Missense variant in LOXHD1 is associated with canine nonsyndromic hearing loss ' , Human Genetics , vol. 140 , pp. 1611-1618 . https://doi.org/10.1007/s00439-021-02286-z

Title: Missense variant in LOXHD1 is associated with canine nonsyndromic hearing loss
Author: Hytönen, Marjo K.; Niskanen, Julia E.; Arumilli, Meharji; Brookhart-Knox, Casey A.; Donner, Jonas; Lohi, Hannes
Other contributor: University of Helsinki, Medicum
University of Helsinki, Hannes Tapani Lohi / Principal Investigator
University of Helsinki, Department of Medical and Clinical Genetics
University of Helsinki, Biosciences






Date: 2021-11
Language: eng
Number of pages: 8
Belongs to series: Human Genetics
ISSN: 0340-6717
DOI: https://doi.org/10.1007/s00439-021-02286-z
URI: http://hdl.handle.net/10138/335460
Abstract: Hearing loss is a common sensory deficit in both humans and dogs. In canines, the genetic basis is largely unknown, as genetic variants have only been identified for a syndromic form of hearing impairment. We observed a congenital or early-onset sensorineural hearing loss in a Rottweiler litter. Assuming an autosomal recessive inheritance, we used a combined approach of homozygosity mapping and genome sequencing to dissect the genetic background of the disorder. We identified a fully segregating missense variant in LOXHD1, a gene that is known to be essential for cochlear hair cell function and associated with nonsyndromic hearing loss in humans and mice. The canine LOXHD1 variant was specific to the Rottweiler breed in our study cohorts of pure-bred dogs. However, it also was present in some mixed-breed dogs, of which the majority showed Rottweiler ancestry. Low allele frequencies in these populations, 2.6% and 0.04%, indicate a rare variant. To summarize, our study describes the first genetic variant for canine nonsyndromic hearing loss, which is clinically and genetically similar to human LOXHD1-related hearing disorder, and therefore, provides a new large animal model for hearing loss. Equally important, the affected breed will benefit from a genetic test to eradicate this LOXHD1-related hearing disorder from the population.
Subject: BILATERAL DEAFNESS
GENOME ANALYSIS
PREVALENCE
MUTATIONS
GENE
TOOL
PIGMENTATION
HOMOZYGOSITY
SERVER
PLINK
1184 Genetics, developmental biology, physiology
413 Veterinary science
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